Fractional unstable patterns of energy in α−helix proteins with long-range interactions

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

Energy transport and storage in α−helix proteins, in the presence of long-range intermolecular interactions, is addressed. The modified discrete Davydov model is first reduced to a space-fractional nonlinear Schrödinger (NLS) equation, followed by the stability analysis of its plane wave solution. The phenomenon is also known as modulational instability and relies on the appropriate balance between nonlinearity and dispersion. The fractional-order parameter (σ), related to the long-range coupling strength, is found to reduce the instability domain, especially in the case 1 ≤ σ <2. Beyond that interval, i.e., σ > 2, the fractional NLS reduces to the classical cubic NLS equation, whose dispersion coefficient depends on σ. Rogue waves solution for the later are proposed and the biological implications of the account of fractional effects are discussed in the context of energy transport and storage in α−helix proteins.
Original languageEnglish
Pages (from-to)386-391
Number of pages6
JournalChaos, Solitons and Fractals
Volume116
DOIs
Publication statusPublished - Nov 1 2018

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Long-range Interactions
Helix
Energy Transport
Fractional
Energy Storage
Unstable
Protein
Nonlinear Equations
Energy
Modulational Instability
Cubic equation
Fractional Order
Discrete Model
Plane Wave
Order Parameter
Stability Analysis
Nonlinearity
Coefficient
Range of data

Cite this

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title = "Fractional unstable patterns of energy in α−helix proteins with long-range interactions",
abstract = "Energy transport and storage in α−helix proteins, in the presence of long-range intermolecular interactions, is addressed. The modified discrete Davydov model is first reduced to a space-fractional nonlinear Schr{\"o}dinger (NLS) equation, followed by the stability analysis of its plane wave solution. The phenomenon is also known as modulational instability and relies on the appropriate balance between nonlinearity and dispersion. The fractional-order parameter (σ), related to the long-range coupling strength, is found to reduce the instability domain, especially in the case 1 ≤ σ <2. Beyond that interval, i.e., σ > 2, the fractional NLS reduces to the classical cubic NLS equation, whose dispersion coefficient depends on σ. Rogue waves solution for the later are proposed and the biological implications of the account of fractional effects are discussed in the context of energy transport and storage in α−helix proteins.",
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Fractional unstable patterns of energy in α−helix proteins with long-range interactions. / Tabi, Conrad Bertrand.

In: Chaos, Solitons and Fractals, Vol. 116, 01.11.2018, p. 386-391.

Research output: Contribution to journalArticle

TY - JOUR

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AB - Energy transport and storage in α−helix proteins, in the presence of long-range intermolecular interactions, is addressed. The modified discrete Davydov model is first reduced to a space-fractional nonlinear Schrödinger (NLS) equation, followed by the stability analysis of its plane wave solution. The phenomenon is also known as modulational instability and relies on the appropriate balance between nonlinearity and dispersion. The fractional-order parameter (σ), related to the long-range coupling strength, is found to reduce the instability domain, especially in the case 1 ≤ σ <2. Beyond that interval, i.e., σ > 2, the fractional NLS reduces to the classical cubic NLS equation, whose dispersion coefficient depends on σ. Rogue waves solution for the later are proposed and the biological implications of the account of fractional effects are discussed in the context of energy transport and storage in α−helix proteins.

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